 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pavir.7KG185700.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
EIL |
| Protein Properties |
Length: 388aa MW: 40966.2 Da PI: 12.3574 |
| Description |
EIL family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.7KG185700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | EIN3 | 158.1 | 1.1e-48 | 5 | 133 | 29 | 160 |
XX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 29 eaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknli 118
+++ ++ k++ +++++rrk+m raQDg++++Mlk+me+cna+GfvYg + e g pv+g+sdsLr+WWk++v fdr+gp a+ + +
Pavir.7KG185700.1.p 5 SSSSSKDKEESPENRYRRKAMLRAQDGVIRHMLKMMEACNARGFVYGVVGEDGVPVSGSSDSLRGWWKDDVGFDRAGPLALLAA--HQQA 92
4456788999**********************************************************************9966..5667 PP
XXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TT CS
EIN3 119 lsgesslqtersseshslselqDTtlgSLLsalmqhcdppqr 160
++ +s + + + s h l+++qD+tlgSLLsal+qhc+pp
Pavir.7KG185700.1.p 93 AEPGSPMAA-AASFLHGLHDIQDSTLGSLLSALIQHCEPPPA 133
777777745.99***************************965 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 388 aa
Download sequence Send
to blast |
MLAASSSSSK DKEESPENRY RRKAMLRAQD GVIRHMLKMM EACNARGFVY GVVGEDGVPV 60
SGSSDSLRGW WKDDVGFDRA GPLALLAAHQ QAAEPGSPMA AAASFLHGLH DIQDSTLGSL 120
LSALIQHCEP PPAELPPGPG PGAAVVADGA GALVGHAGRG AGAPGRAALP EAARPQEGLE 180
DLAAERGDQA PVPALRPDAQ ARVAVQAAAA QDERPGRRDL VQGHRAGGGA RPPRAARPAD 240
HADRGGGGRQ GAGHRRRPLA TCGGARRQAQ APGRTRERRH GRRRRRRRRQ GVAGAAGHRV 300
CPRCGPQLDR RAHEALLPMP AGARRRRRRA RGEGRGGGRR RRPRAAQRRR AAGGAPRRHA 360
PPRSPAARRR RAGARRRRAP PQPAGGR*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 275 | 288 | RERRHGRRRRRRRR |
| 2 | 278 | 287 | RHGRRRRRRR |
| 3 | 280 | 289 | GRRRRRRRRQ |
| 4 | 281 | 288 | RRRRRRRR |
| 5 | 282 | 288 | RRRRRRR |
| 6 | 323 | 330 | RRRRRRAR |
| 7 | 324 | 341 | RRRRRARGEGRGGGRRRR |
| 8 | 326 | 341 | RRRARGEGRGGGRRRR |
| 9 | 338 | 349 | RRRRPRAAQRRR |
