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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.7KG102000.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
FAR1 |
| Protein Properties |
Length: 311aa MW: 36293.4 Da PI: 8.3025 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.7KG102000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 41.4 | 4.6e-13 | 28 | 118 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskks.........krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkl 81
++Yn Y+ e+GF +r k+++s ++++ +++f+C ++g++++e k+ ++ rt+C akl++ +++d++w+v +
Pavir.7KG102000.1.p 28 EYYNLYSWECGFGIRCGKKSYSmtreslklpQEKRYQLSQEFNCCCSGRPSRELKT--------TSARTNCPAKLQLGRTTDHRWVVVEH 109
69**************99999988899999878888899***********999888........899*********************** PP
FAR1 82 eleHnHela 90
+ HnHe++
Pavir.7KG102000.1.p 110 SPIHNHEMS 118
*******97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MKFADRNSEY IINPAVGTKF DDCEEAYEYY NLYSWECGFG IRCGKKSYSM TRESLKLPQE 60
KRYQLSQEFN CCCSGRPSRE LKTTSARTNC PAKLQLGRTT DHRWVVVEHS PIHNHEMSET 120
YGENKLWPSH THLDKYTRSL VRMLRENNVP ITKLYSILGT FFGKMENVPT TKRCLKNLCH 180
KINREQAEND IKKTLNLFGE FMKDDPGFMY SIGQDEDGRI KTMIWTNSKS RMQYEHFGDA 240
ITFDTTYKTN MYEMPFRLFV GVNNHFQSVL LGGVLMTDEK IETFRWIFKE FTRLMGGKEP 300
VTILTGESAY *
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