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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.7KG062300.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
FAR1 |
Protein Properties |
Length: 514aa MW: 59077.2 Da PI: 8.6636 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.7KG062300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 69.5 | 8.4e-22 | 63 | 144 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
++Yn+YA +vGFsvrks++k++ +g+ +++fvCs eg+r++++++ + +rt+C+a+++ + +k+g+w ++k++leHnH la
Pavir.7KG062300.1.p 63 EMYNTYAGQVGFSVRKSRTKHR-LDGSLSSKHFVCSSEGHRKNKSSQ-------KDISRTDCDARVQFSINKEGVWILQKVKLEHNHYLA 144
58***************98876.9999**************998766.......999******************************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 514 aa
Download sequence Send
to blast |
MEDPRSPQIV VVGGDGGEEE QPIRQIGSMK NEIPNEEVVD ISGKKLIAPQ VGMSFQSKKK 60 AFEMYNTYAG QVGFSVRKSR TKHRLDGSLS SKHFVCSSEG HRKNKSSQKD ISRTDCDARV 120 QFSINKEGVW ILQKVKLEHN HYLASPDKSH KLRSQREVIE ADTKLIGQIR QAGMKPDQVF 180 DFIKEHYGVE DKVSFSKMDC FNEIGHPTFF YVVQVDKENG RIANFFWADG HSIMDYKCFG 240 DAVSFDTTFQ TNKFEMPFTP ILGTNHHKQT IIFGCIYEDR SEAYFIEKWN ELLAKYSLEN 300 NSWMTNLYAL RAKWAVVYRD SFTANMNSTQ RSEGMNNVFK KRFRRKLGLS ELLVECEKVA 360 TSLRSNELDA DFKSRRKTPV SYIPNPPMLK TAAESYTRRM YSEFEEEFKN QFTLSCQLLQ 420 AAGTTSTFFV KYMESDRGAT VVFNTEDSTI TCSCRMFECI GLLCKHALRV YNMNGVYILP 480 SQYILPRWTK YAKNGFYIPK QGTEEGDLKT QAAL
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