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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.7KG048700.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
FAR1 |
Protein Properties |
Length: 190aa MW: 22275.8 Da PI: 9.1789 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.7KG048700.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 84.3 | 2e-26 | 28 | 119 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88
+fYn+YA e GFsvrk ++++ ++++ei r+fvCs++g+r+ ++ k ++k+r++r +r+gC a++++ ++k g w+v+++ eH+He
Pavir.7KG048700.2.p 28 EFYNNYAMEKGFSVRKCYMERDQTTKEICLRRFVCSRQGFRAAKHMKkANKKRKPRDISRCGCAARMVIAQNKeMGLWYVKDFIDEHTHE 117
6****************************************9887665799999*****************9999*************** PP
FAR1 89 la 90
la
Pavir.7KG048700.2.p 118 LA 119
96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 190 aa
Download sequence Send
to blast |
MVDLSIEALL DYQEIVSKTF RSEKEGYEFY NNYAMEKGFS VRKCYMERDQ TTKEICLRRF 60 VCSRQGFRAA KHMKKANKKR KPRDISRCGC AARMVIAQNK EMGLWYVKDF IDEHTHELAA 120 PDLACLLHSH RRISDEQKAD IIEMEIAGVR KHQIMNILEM QYGGYDKVRC VSRDAYNFCY 180 RYKLGTIAK*
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