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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.6NG344200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 472aa MW: 50680.5 Da PI: 6.9229 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.6NG344200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 33.5 | 9.2e-11 | 324 | 382 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
kr +r NR +A rs +RK +i+eLe kv++L++e ++L +l +l+ +a l +++
Pavir.6NG344200.1.p 324 KRVKRILANRQSAARSKERKMRYIQELEHKVQVLQTEATTLSAQLTMLQRDSAGLATQN 382
899*********************************************99998887766 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 472 aa
Download sequence Send
to blast |
MDDPGAADPG AARHHLSPQL GGQPPVPRSP TPLDLASGYR RLSPSLRPPA HPQPRLPSPY 60 AQIPAPGGGD HHARSLSQPL FFSLDPLPPP PYADLGAAAH AVPPSPASSS SDPQQQQQPP 120 PPPLGLPPRK GAHRRSHSDI PFGGFAPLSP PLPPPAPVKR EVTVAAEGCR LDGGGGDAAL 180 YDLVNAYMDL DGIDPLNSSE DRHDDRDSRA SGTRAGSAAE SSENEAESQS TSIDRKDGGK 240 SRHCRSLSMD SFMGTLNFSA GDESPKLPLP SPGGSLTRSG SGSLEGGAVA LFDMEFANGE 300 FTESEKKKIM ANERLAEIAL TDPKRVKRIL ANRQSAARSK ERKMRYIQEL EHKVQVLQTE 360 ATTLSAQLTM LQRDSAGLAT QNNELKIRLQ AMEQQAQLRD ALNEALTAEV QRLKLATGEI 420 TDGRMPKSLQ QQMNSQMLQL QQLQIQQQQQ QQAPQSQQQG QQQQQQPQKS A*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU955809 | 0.0 | EU955809.1 Zea mays clone 1547185 DNA binding protein mRNA, complete cds. |