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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.6NG289000.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 224aa MW: 24415 Da PI: 8.891 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.6NG289000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 35.6 | 2e-11 | 111 | 161 | 3 | 53 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53
e +r rr+ +NRe+ArrsR RK+ ++ eL v L + N++L + l++
Pavir.6NG289000.1.p 111 EERRRRRMVSNRESARRSRMRKQRQLTELWAQVSHLRGDNRRLLDDLNRAL 161
67899***************************************9998865 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 224 aa
Download sequence Send
to blast |
MYHHFHGEVA SLRFLSPPNA SFAHHHMNMA LPPQAYFPPP FEPASAFHDD AASLLSVDGG 60 DVASFELDTV VREAAHLAGR SGSRSPSSGS GSDGAAGSRY QMNAVAVAAE EERRRRRMVS 120 NRESARRSRM RKQRQLTELW AQVSHLRGDN RRLLDDLNRA LRGCADARRE SARLRDEKAE 180 LAKKLEQLLR SATATEKAAA AAASSDRTCS SEPCNNTSAD TSE*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 125 | 132 | RRSRMRKQ |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU976632 | 1e-93 | EU976632.1 Zea mays clone 985663 bZIP protein mRNA, complete cds. |