 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pavir.6NG157500.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
Nin-like |
| Protein Properties |
Length: 133aa MW: 15341.3 Da PI: 5.6837 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.6NG157500.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 52.7 | 8.5e-17 | 93 | 131 | 2 | 40 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyG 40
+k+ ++e +s+yFs+pik+AA+eL+v+lTvLKr+CR +G
Pavir.6NG157500.1.p 93 KKRSTFELVSRYFSMPIKQAARELDVGLTVLKRRCRALG 131
677799*******************************99 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 133 aa
Download sequence Send
to blast |
MEELRFNEKG YHYYHGLKLH KDEGYFQLQD FSADYLLGEE THFCAISCPE SSFSQEELVC 60
LSEVDFASFW ALVEEEDARR KSEEGPRSGP GKKKRSTFEL VSRYFSMPIK QAARELDVGL 120
TVLKRRCRAL GAS
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 78 | 94 | RRKSEEGPRSGPGKKKR |
