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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.6NG049900.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
FAR1 |
| Protein Properties |
Length: 325aa MW: 37829.6 Da PI: 6.5875 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.6NG049900.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 70.9 | 3.1e-22 | 23 | 116 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtf..vCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHn 86
+fYn YA e GFsvrk++ +++ ++e+t+r+f Cs eg+r+e++ + t+++r++ra tr+gC+a+l v++++ +g w+v+ ++ H+
Pavir.6NG049900.1.p 23 EFYNGYAFEKGFSVRKDRVRYKPSTKEVTWRRFlrLCSFEGYRDEKHFErTDQKRQPRALTRCGCNARLDVQRSEsSGIWYVAGFVDVHS 112
6********************************555********9998768999*******************999************** PP
FAR1 87 Hela 90
H++a
Pavir.6NG049900.1.p 113 HPFA 116
*986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MDEIQEYNYV ANQNFNTEEE FFEFYNGYAF EKGFSVRKDR VRYKPSTKEV TWRRFLRLCS 60
FEGYRDEKHF ERTDQKRQPR ALTRCGCNAR LDVQRSESSG IWYVAGFVDV HSHPFAKPEH 120
AFVLRSHRGL NDPQKAEAVE LGLGGLRPYQ IMDVMATTHG GPGETGFISQ DLYNFFLRQK 180
KGKVQGNDAE FVMNHMRQMQ EKDPEIFYKY SLDAEGRLKN LFWSDAQSQM DYGIFGDVMV 240
FDSTYRVNRY NLPFVPFIGV NHHRSTVVFG CGILSDETIL SYVWLLEAFL EAMHQQHPRS 300
LITDGDSWYL LTQIDKSASA WISL*
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