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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.6KG341300.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
WRKY |
Protein Properties |
Length: 684aa MW: 74110.2 Da PI: 6.5138 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.6KG341300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 102.1 | 3.3e-32 | 281 | 337 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+DgynWrKYGqK+vk+se+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g+H h+
Pavir.6KG341300.1.p 281 EDGYNWRKYGQKQVKNSEHPRSYYKCTHPNCPVKKKVERSQ-EGHITEIVYKGSHSHP 337
8****************************************.***************7 PP
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2 | WRKY | 104.5 | 5.8e-33 | 492 | 550 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct+agC+v+k+ver+++d k v++tYeg+Hnhe
Pavir.6KG341300.1.p 492 LDDGYRWRKYGQKVVKGNPNPRSYYKCTYAGCSVRKHVERASNDLKSVITTYEGKHNHE 550
59********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009555 | Biological Process | pollen development |
GO:0009942 | Biological Process | longitudinal axis specification |
GO:0030010 | Biological Process | establishment of cell polarity |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 684 aa
Download sequence Send
to blast |
MAGTDNRRAL MEDWMLPSPS PRTLMSSFLN EEFSSGPFSS IFGDNSSNKP QDGIDKSKTF 60 ADPSVEETVQ DTKAPLQLES NLFSTNQKST SHGGLAERMA ARAGFGVLKI DTSRVSSSAP 120 IRSPVTIPPG VSPRELLESP VFLPNAIAQP SPTTGKLPFL MPNNFKSMIS SVPKKAEDQS 180 QDDCAFSFQT ILRSKPPSFS TVDKGLSAFH QNQSLNDSQQ ELSLQASTTA TKDENEENLV 240 KPSTCDSMLD NDHPSPADEQ VESEQNQNGE DSSVSVITPA EDGYNWRKYG QKQVKNSEHP 300 RSYYKCTHPN CPVKKKVERS QEGHITEIVY KGSHSHPLPP PNRRPSVQSS HVNDLQADGS 360 ENFRSKPGHN TETSRGMALN DHLDVHSGGL ERNLSGSLTT TEIADTCVME SQEAVDVSST 420 VSSIEKDDRA THGTIPLTYG GDEDETESKR RKMEVSATTN TTTNAFDMAA MASRAVREPR 480 IVVQTTSEVD ILDDGYRWRK YGQKVVKGNP NPRSYYKCTY AGCSVRKHVE RASNDLKSVI 540 TTYEGKHNHE VPAARNSSGQ PNSSSGAAPQ GSNLHRRPEQ AQPSIPQLSA AGAYGSLCLP 600 PQLSATSGGF SFGMLPPGMA VPVPSLRTFM PASVPGHPPK MQGCAGLVLP RGEVKVNPDE 660 QSQLQVGNGN AMAAYQQFMG RLP*
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