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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.5NG497000.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
FAR1 |
| Protein Properties |
Length: 224aa MW: 25694.2 Da PI: 9.8965 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.5NG497000.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 68.6 | 1.6e-21 | 11 | 103 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85
+fY++YA ++GFs+r+ +++k + ++ ++fv skeg r+e kkk ++k +r+ + r+gCka+++ k+++dgk+ev+++++ H
Pavir.5NG497000.1.p 11 SFYKAYADHAGFSIRTWTQHKD--GDVVKLKKFVSSKEGWRKEGKKKeneqvDQKPERKIKIIRVGCKAMIEFKRQSDGKYEVSRFVKTH 98
5**************9998887..888999************999997777666667788889*************************** PP
FAR1 86 nHela 90
+Hela
Pavir.5NG497000.1.p 99 THELA 103
***97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 224 aa
Download sequence Send
to blast |
MIFDSWEQGK SFYKAYADHA GFSIRTWTQH KDGDVVKLKK FVSSKEGWRK EGKKKENEQV 60
DQKPERKIKI IRVGCKAMIE FKRQSDGKYE VSRFVKTHTH ELASPRRRHF LRSNREVSAE 120
LKSTLFSCHK VLIGTSATFR LLSVEEGGGG CENFGCTKHD LKNYDRDFKH AICHGDGQIL 180
IDMSILDAIS NLRDNFFSEH LQSRNFSDQS RMDGFVPLPA STK*
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