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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.5NG478700.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
WRKY |
| Protein Properties |
Length: 293aa MW: 30008.3 Da PI: 5.0357 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.5NG478700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 73.7 | 2.3e-23 | 78 | 129 | 9 | 59 |
EEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 9 KYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
YGqK++kgs+fpr+YYrC+s+ gCp++k+ver++ +p++v++tY+ Hnh+
Pavir.5NG478700.1.p 78 DYGQKPIKGSPFPRAYYRCSSNkGCPARKQVERNRAEPDTVIVTYSFVHNHS 129
6********************99****************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 293 aa
Download sequence Send
to blast |
MDGEWSDGAA AASPTVSGGE GKVGPRGVPA DDCPGLSPPV SPPAPSTAAP AASGRRRSAN 60
KRVVTVPLAD VSGPRPKDYG QKPIKGSPFP RAYYRCSSNK GCPARKQVER NRAEPDTVIV 120
TYSFVHNHSD VVPRAQQNRP APKPKPKPAP PEPAESLSSG SHEVAATACA GSVATAEGGG 180
AAAAVEVHDD FRWLYDGVSV TSSTSPSDVD AADEMLYGTM FFGAAPPAPL PNEFGDVAGL 240
FDGEGGGEED AMFAGLGELP ECAMVFRRHA GGGLPMRGGV KVEQPEESTA MS*
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