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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.5NG358300.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
FAR1 |
| Protein Properties |
Length: 420aa MW: 47998.1 Da PI: 9.2921 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.5NG358300.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 45.6 | 2.4e-14 | 12 | 91 | 2 | 81 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkl 81
f+ +Y+ + GF+vrk++++k++ +g+it+ +fvC +e +r +k++ ++ +raetrt+C+ ++++k+++ ++ +v+++
Pavir.5NG358300.1.p 12 FWLRYGGHRGFEVRKRYTNKRESDGKITSCKFVCANESHRVADKRD-PLTKCPRAETRTDCQVHMNLKLDRkKEILKVSDI 91
999***************************************9999.9999******************986666677665 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 420 aa
Download sequence Send
to blast |
MEFGSSDEAW AFWLRYGGHR GFEVRKRYTN KRESDGKITS CKFVCANESH RVADKRDPLT 60
KCPRAETRTD CQVHMNLKLD RKKEILKVSD IYKHFKFDFD IIRFFKHFER VVQGKRNNEL 120
DSELNSRKKL PKICMKRPPP MLSQASKLYT PPIFEAFQGE YERSLAACTN AFDGNNEYLI 180
AHCIYEEEYK VIGDPMKQTV TCSCQQFDRI GILCGHALKV LNLMNIKSLP PQYVGTVQDN 240
QGRNIIENPK MDAMLRFIFM SHKFLNLAHR VANFPECTML VDSTLDTLGK QIEDKINAYT 300
GTFEDPTTVP TNATSPNELL INARLKKKDV QTKSSKQQRN WLDKKPKSGK KRKSKATSQG 360
KKQCVSGYLA LQGSIIDDFD GEQALMDKEK DSNEKMALKS FTQLLTGPIS DDLLTGDLL*
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