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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.5NG289600.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
FAR1 |
Protein Properties |
Length: 503aa MW: 59810.6 Da PI: 9.2474 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.5NG289600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 26.9 | 1.6e-08 | 6 | 45 | 50 | 90 |
FAR1 50 kerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
er t++ +t+ k++++++++ ++ w+vt+l+leHnH ++
Pavir.5NG289600.1.p 6 AERDTNVLVKTNYKCCMVISER-KDIWRVTRLQLEHNHLMS 45
68999****************9.9**************886 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 503 aa
Download sequence Send
to blast |
MEEITAERDT NVLVKTNYKC CMVISERKDI WRVTRLQLEH NHLMSPGTKY FRAHKNMTDQ 60 EKKKIRTLHK CNIPTKKMMY LLSFLRGGLG ATPYRDKDIT NYRGKISRET NQNDIMQALM 120 YLTKKKEEDP SFYFRFLVDS THKVKCIFWT DPRSIRYYQN FGDCVSFDTT YLTNKYRMPF 180 APFAGITGHG LTCIFGCALI SDETTDTFKW LFQTFLEAVG GKEPISIMTD QDGTMRSAIA 240 QIFPNASHRS CVFHIKEEFK DIIDNSLTKE EFETLWQQMI QKHEIQHIKY FQDIYNTRET 300 WAPVWFKQEF YPFINTTSRS EGTNARYKRN VGPQYSITSF LKEYERIQET IYDNERQADH 360 ETNIKKKSKL WSNYCIEQQA QEAYNLKIFK KFQWQLRCAT KLQADELEKG KLYKVYTTPD 420 HPFKEFRSRT YIVAADQQNQ DFSCICAKFQ KDGMLCCHIL KVMVNNDISK IPEKYIIDRW 480 RKKEQKMLLL SDTIIFHSWQ RK*
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