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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pavir.5NG044300.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
BES1 |
| Protein Properties |
Length: 351aa MW: 36571.9 Da PI: 8.6011 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.5NG044300.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 208.4 | 2e-64 | 21 | 163 | 1 | 145 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasasp 90
+g+gr+ptw+ErEnnkrRERrRRaiaaki+aGLRa+G+yklpk++DnneVlkALc+eAGwvve+DGttyrkgskp+e+++a+g+s s sp
Pavir.5NG044300.1.p 21 AGAGRMPTWRERENNKRRERRRRAIAAKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGSKPQERMDAIGCSVSPSP 110
589*************************************************************************************** PP
DUF822 91 esslqsslkssalaspvesysaspksssfpspssldsislasa......asllpvlsvlsl 145
+ss+q sp++sy+asp+sssfps +s+ +++ ++ + +lp+l++ s+
Pavir.5NG044300.1.p 111 CSSYQ--------LSPRASYNASPTSSSFPSGASSPFLQPNEMangidgNPILPWLKTFSN 163
*****........677777777777777777777666655544555665888888888776 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MASGGGGGGG GGGGGGALGE AGAGRMPTWR ERENNKRRER RRRAIAAKIF AGLRAHGGYK 60
LPKHCDNNEV LKALCNEAGW VVEPDGTTYR KGSKPQERMD AIGCSVSPSP CSSYQLSPRA 120
SYNASPTSSS FPSGASSPFL QPNEMANGID GNPILPWLKT FSNGTPSKKH PLLPPLLIHG 180
GSISAPVTPP LSSPSARTPR MKTDWDESAV QPPWHGANSP SIVNSTPPSP GRSMAPDPAW 240
LAGIQISSTS PNSPTFSLVS TNPFSVFKES IPVGSSSRMC TPGQSGTCSP AIPGMPRPSD 300
VHMMDAVSDE FAFGSSTNGA QQAAGLVRAW EGERIHEDSG SDDLELTLKL *
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 1e-22 | 25 | 95 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 1e-22 | 25 | 95 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 1e-22 | 25 | 95 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 1e-22 | 25 | 95 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
