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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pavir.5KG542500.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
VOZ |
| Protein Properties |
Length: 560aa MW: 62405.7 Da PI: 5.093 |
| Description |
VOZ family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.5KG542500.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | VOZ | 426 | 5.9e-131 | 260 | 477 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaataksp 89
p+psafl+pkcalwdc+rpa gse+++dycs++ha+la++e g+pgt+pv+rp+gidlkdg+lfaalsak+qgk+vgip cegaataksp
Pavir.5KG542500.1.p 260 PAPSAFLRPKCALWDCPRPAIGSERWHDYCSMYHADLAVKEeGPPGTMPVIRPRGIDLKDGPLFAALSAKIQGKHVGIPICEGAATAKSP 349
89*************************************9879*********************************************** PP
VOZ 90 wnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeinelda 179
wna+elfdl ++ege+irewlffdkprraf+sgnrkqrslpdy+grgwhesrkqvmk+fgglkrsyymdpqps+s+ewhlyeyein++da
Pavir.5KG542500.1.p 350 WNAPELFDLYIFEGESIREWLFFDKPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYYMDPQPSNSYEWHLYEYEINDCDA 439
****************************************************************************************** PP
VOZ 180 lalyrlelklvdekksakgkvskdsladlqkklgrlta 217
+alyrle+k++d+kk+ak+kv++++l+++q++++rl+a
Pavir.5KG542500.1.p 440 FALYRLEFKSSDAKKNAKSKVACNPLSEIQQQMVRLSA 477
************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009408 | Biological Process | response to heat |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009631 | Biological Process | cold acclimation |
| GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 560 aa
Download sequence Send
to blast |
MGKGPSSRAA SRHHQFRARA KTRVDDLQEM FSGLQSARKD SRPADAAVLE AQLQQMLREW 60
RSELSAPSPA SSLQGNTREL SDPPSETLRL LQLATADEED DATSKLVEQQ QQQQPPPPPP 120
PPPPANQSQG HALGCQDLKP EPREEEVDIA VAQPQPQLLG QGVLPNGAPA AAAVFHDQMY 180
YVNQELTVED FLYDDDYKIN LSGSNPDVLN NLEGIGQLEF PQFNFPQELP PNVYLDMSNC 240
GQSTGDVFLH MSDLLTTMTP APSAFLRPKC ALWDCPRPAI GSERWHDYCS MYHADLAVKE 300
EGPPGTMPVI RPRGIDLKDG PLFAALSAKI QGKHVGIPIC EGAATAKSPW NAPELFDLYI 360
FEGESIREWL FFDKPRRAFD SGNRKQRSLP DYNGRGWHES RKQVMKDFGG LKRSYYMDPQ 420
PSNSYEWHLY EYEINDCDAF ALYRLEFKSS DAKKNAKSKV ACNPLSEIQQ QMVRLSADSP 480
VDTKRTARGR TKANPIDVNT NIYSVPNTTV QANVPNAYQP VSEAHQMTYL NGSVVYGPHL 540
PYGYSAERGD FYWNSNDGT*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT042403 | 0.0 | BT042403.1 Zea mays full-length cDNA clone ZM_BFb0220N09 mRNA, complete cds. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Yasui Y,Kohchi T
VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
[PMID:25351333] - Kumar S,Choudhary P,Gupta M,Nath U
VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
Plant Physiol., 2018. 176(4): p. 2917-2930
[PMID:29507119] - Song C,Lee J,Kim T,Hong JC,Lim CO
VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
Planta, 2018. 247(6): p. 1439-1448
[PMID:29536220]
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