 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pavir.5KG052600.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
Dof |
| Protein Properties |
Length: 242aa MW: 24245.8 Da PI: 9.0828 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.5KG052600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 115.7 | 1.9e-36 | 43 | 96 | 6 | 59 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59
l+cprC+s +tkfCyynny+ sqPr+fC++CrryWt+GGalrnvPvGgg+rk
Pavir.5KG052600.1.p 43 LPCPRCESVDTKFCYYNNYTQSQPRHFCRTCRRYWTRGGALRNVPVGGGTRKAT 96
78*************************************************976 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MVRCAADMEA GDQAPEGVAL AVVPPAAGGA GGGAGGGREP LGLPCPRCES VDTKFCYYNN 60
YTQSQPRHFC RTCRRYWTRG GALRNVPVGG GTRKATPATR RKRPASTPPA PPAGAGVPLP 120
PPPLTASGPH AALLRQYGGL PFPAPAMALP LAAVDPDRRL LDLGGSFGSL LAAAPGPDVV 180
GAHFSAGFLV GGLAPALVHA PGGGAAAAAG TLPPPPPQPQ QVSQALPEGL LWSMGWPDLS 240
I*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT061950 | 7e-65 | BT061950.2 Zea mays full-length cDNA clone ZM_BFb0200H06 mRNA, complete cds. |
| GenBank | KJ727013 | 7e-65 | KJ727013.1 Zea mays clone pUT3994 C2C2-DOF transcription factor (DOF7) mRNA, partial cds. |
