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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.4NG125500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
FAR1 |
Protein Properties |
Length: 353aa MW: 41238.6 Da PI: 9.5523 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.4NG125500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 42.7 | 1.8e-13 | 33 | 113 | 1 | 72 |
FAR1 1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek 72
k++n+YA+ +GF ++++ + krn+e+++ t++C++ g ++++k+ + e++t++ +t+Ck++++ + k
Pavir.4NG125500.1.p 33 KYFNNYAYLAGFAAIIAHHACTqskKRNNEVIRITYKCNRRGVQDTSKEGdtqeeeITAESETNVLVKTNCKCCMEAYNLK 113
69**************999766667999****************999988776666666777*************865444 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MNEFLQATTI SEIDDQYIPR EGMEFSSANE AQKYFNNYAY LAGFAAIIAH HACTQSKKRN 60 NEVIRITYKC NRRGVQDTSK EGDTQEEEIT AESETNVLVK TNCKCCMEAY NLKIFKKFQW 120 QLRRATKLQA TEIEKDKMYE VYMAEDQLVQ EFRSRRYIVI TDLQNEDLSC ICGKFQKDGM 180 LCCHILKVMM KNDIRKIPDK YIIDRWRKKE KKMISKINIR LRVEATALRK EIERLTKELK 240 EMDKYKMKNI DPVFPNVEIA AGNGNITEPS IQLQDPDMAV TKGRPSKLKS NKRTMPKAEE 300 MRKKQKQKYA CKKCDRPGHN TTTCTVEFKM TGTQQDTTED HPTKIKQNKQ RQ*
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