 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pavir.4NG102500.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
FAR1 |
| Protein Properties |
Length: 332aa MW: 37563.7 Da PI: 5.9695 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.4NG102500.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 70.9 | 2.9e-22 | 23 | 111 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89
+f+ +Y+ +GF+vrk++s+ s+ +g++t+ ++vCs+eg+r++ +++ + ++ raetrtgCk ++++++++ g++evt+++leHnH l
Pavir.4NG102500.1.p 23 QFWVTYGGYAGFDVRKRYSNVSSFDGKVTSCRYVCSNEGHRRKGQTD-HVTKCFRAETRTGCKSRMTLTLDRgAGNYEVTDVVLEHNHIL 111
69*****************************************9999.99999*******************9***************88 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MAEFNKGTPQ VGLRFKTPDE AWQFWVTYGG YAGFDVRKRY SNVSSFDGKV TSCRYVCSNE 60
GHRRKGQTDH VTKCFRAETR TGCKSRMTLT LDRGAGNYEV TDVVLEHNHI LDLPETRHLM 120
ASQRKISEMQ AFDIETADDS GIRPKAAHEL ACRQVGGLLN LTYTCRDQKN YLQSKRQREL 180
AFGQAGSMLK YFHEKISENP SFQYALQVDC EERITNIFWA DAKMIIDYAH FGDVVTFDTT 240
FGTNKKYRPF GVFLGLNQFR ETTIFGAGQG NDEGEEGEDR DGAHPHVQAE DDSSNKETNF 300
GMHEYSAIGT FTRLLTSAAC DEGNIYNEDL F*
|
