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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.4KG388900.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 194aa MW: 19714.7 Da PI: 5.7081 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.4KG388900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 45.6 | 1.8e-14 | 17 | 60 | 8 | 55 |
AP2 8 wdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+++ +gr++AeIrdp k++ ++lg+f++ae Aa+a++aa+++l+g
Pavir.4KG388900.1.p 17 RRP-SGRYAAEIRDPA---KKTPIWLGTFDSAEAAARAYDAAARSLRG 60
577.7*********83...36*************************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 194 aa
Download sequence Send
to blast |
MNAGELVLGA PPSAVPRRPS GRYAAEIRDP AKKTPIWLGT FDSAEAAARA YDAAARSLRG 60 PTARTNFPSA AAPAPRHSRP PAPSAAAQAA AAAAAATSSH SSTIESWSDG ATRAALARSA 120 ASVLARSAAP TEEDEDCRSY CGSSSSVLCE DTGGDDAAAS RAPLPFDLNL PPPHDAASET 180 DQMGARYDTL LRL*
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