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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.4KG286000.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
GATA |
| Protein Properties |
Length: 375aa MW: 40717.5 Da PI: 5.625 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.4KG286000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 46.3 | 5.6e-15 | 119 | 153 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C+ Cg+t+Tp+WR gp g+ tLCn CG++ r g+
Pavir.4KG286000.1.p 119 CVDCGATETPQWRAGPTGPGTLCNGCGIRCRAAGE 153
*****************************997765 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 375 aa
Download sequence Send
to blast |
MTCSPCPTSL SRSEQETPVS DEQQLHPPGS AVPSRAAARD MAGSGAAERE REREGRRLAY 60
DDSAWTLLLA AVPRRKRSRR GPASSRWWRE FRRPVPVPVP PPPAAKEPVA RKAARAGRCV 120
DCGATETPQW RAGPTGPGTL CNGCGIRCRA AGERWGQRRR PWRATARTVV SDHQPPPQVG 180
QPIPDLESPP DGQICEKGLA PAPAPDRVTS PPPATESLPS LRTARTDPDS EKQPSKEEEE 240
EEEEPAKKKT SPDKLCDHCA SSSTPKWLCN ACGVRYSQGR LLPEYRRQLK NKQQPPPPAA 300
LSQPVDDSQS VDLMLLPRPG EYLASDLRVG DIDDDSGDAA ANPTDKPGSL QLDPFLLEGP 360
AAPMIVDEEE EEPF*
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