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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.3NG243200.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
FAR1 |
| Protein Properties |
Length: 240aa MW: 26659 Da PI: 6.2309 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.3NG243200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 29.6 | 2.2e-09 | 102 | 201 | 26 | 89 |
FAR1 26 geitkrtfvCskegkreeekkk.....................................tekerrtraetrtgCkaklkvkkekdgkwev 78
+e k fvC+keg+ ++ k+ k+r+++ ++t+Cka++++k+ ++ +v
Pavir.3NG243200.1.p 102 REQHKVIFVCNKEGHGRKAKEGdpanesddsndekrgsepensnkgdgdedaekrkkldGGKKRKRERMHHTDCKARMVIKLI-VDRCHV 190
4566788********999988899*****************************99999878888899999*************.9999** PP
FAR1 79 tkleleHnHel 89
+ + +HnHel
Pavir.3NG243200.1.p 191 IFFAPDHNHEL 201
**********9 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 240 aa
Download sequence Send
to blast |
MDLNEIPPEF HCDFLDCSDA NPSYCTQAVE AIALGGEHDI VQVTGHQVLS NVEATVDNCN 60
LAEKPKDVQT IADSTTGVAD VEEVWSTPPI PYIGQIFSSL TREQHKVIFV CNKEGHGRKA 120
KEGDPANESD DSNDEKRGSE PENSNKGDGD EDAEKRKKLD GGKKRKRERM HHTDCKARMV 180
IKLIVDRCHV IFFAPDHNHE LIVKSSLKKF MRSHKGIPKT EKDFIALLHG CNLSTGRIM*
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