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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.3NG154100.5.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 333aa MW: 35758.8 Da PI: 5.1453 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.3NG154100.5.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.7 | 1.9e-20 | 82 | 133 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+gy+GVr++ +g+WvAeIr+p + r r +lg+f tae+Aa+a+++a+++++ge
Pavir.3NG154100.5.p 82 CGYRGVRQRT-WGKWVAEIREP---N-RvNRLWLGTFPTAEDAARAYDEAARAMYGE 133
79*****999.**********8...2.489************************996 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009408 | Biological Process | response to heat |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MTVDQKAMPM QAQALQPGSR KKRPRRSRDG PTSVAAVIQR WAEHNKQLEH GAEGTKRARK 60 APAKGSKKGC MKGKGGPENT QCGYRGVRQR TWGKWVAEIR EPNRVNRLWL GTFPTAEDAA 120 RAYDEAARAM YGEVARTNFP RQSAATSSQV APAATSAQVA PAAVGSLLPS TSCESTTTSN 180 HSDIASTALK PEVSDISSSL KVEDTVVTEA GSHRSEVISG SSVQHEDHPN TQAIAPNVVD 240 KEVFEPLEPI IANLPEGEDD GFDIEEMLRM MEADPQNKGG VDAGIGQPFY LDGLDSSVLE 300 SMLQSEPQPY SMSGEPDMFL AGFESPGFFE GL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Involved in drought and heat-shock stress tolerance. {ECO:0000269|PubMed:20049613}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By heat shock, high-salt and drought stresses. {ECO:0000269|PubMed:20049613}. |