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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.3NG003500.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
GRAS |
| Protein Properties |
Length: 189aa MW: 20553.3 Da PI: 8.586 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.3NG003500.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 148.5 | 6.2e-46 | 7 | 158 | 226 | 374 |
GRAS 226 evLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres...eerikvErellgreivnvvacegaerrerhetl 312
+L++ + sPk+vv++eqea hn++sF +r++eal+yy+a +dsl+a +++ er+ vEr++lg+e++ v+ ega+rrerh +l
Pavir.3NG003500.1.p 7 GFLSAARAASPKIVVLAEQEAGHNGASFRKRVAEALSYYAAAYDSLDAAAAAYRrpaAERAEVERAVLGEEVRGVLLREGARRRERHDRL 96
69********************************************777554434559******************************** PP
GRAS 313 ekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
++W +r+e aGF+ vpls+ a q lr++++ g + e+ g+++l+W++ pL+svSaWr
Pavir.3NG003500.1.p 97 HQWARRMEVAGFRGVPLSYAALRQGVDTLRRCGVGGCESREHGGCMLLCWRSWPLYSVSAWR 158
*************************************************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 189 aa
Download sequence Send
to blast |
MPAALAGFLS AARAASPKIV VLAEQEAGHN GASFRKRVAE ALSYYAAAYD SLDAAAAAYR 60
RPAAERAEVE RAVLGEEVRG VLLREGARRR ERHDRLHQWA RRMEVAGFRG VPLSYAALRQ 120
GVDTLRRCGV GGCESREHGG CMLLCWRSWP LYSVSAWRPD RGSAYGVGSG YLSPSAPPDH 180
CFDEELMC*
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