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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.3KG530600.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 204aa MW: 21832.9 Da PI: 4.7388 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.3KG530600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 48.3 | 2.1e-15 | 130 | 183 | 4 | 57 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
k+ rr+ +NRe+Ar sR+RK+a + Le v +L++eN +L k+l ++++++
Pavir.3KG530600.1.p 130 TKKMRRMLSNRESARQSRKRKQAHLTDLESQVSKLTSENASLLKRLADMTQKYK 183
6999***********************************999966666665555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 204 aa
Download sequence Send
to blast |
MAGAGAGAAA AAAADDDVVE VSCGGDGRDP GAYAAVLKRR LDLYCAAVAK SMEAKSQESS 60 LGYPNSQASD TSQLISQASF DDDGDGATLV INSNIIDHED FRGNPANNGT SKEQSDDDGD 120 LEENTDPANT KKMRRMLSNR ESARQSRKRK QAHLTDLESQ VSKLTSENAS LLKRLADMTQ 180 KYKDATLDNR NLTVDVETMR RKV*
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Functional Description ? help
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Source |
Description |
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT042103 | 1e-177 | BT042103.1 Zea mays full-length cDNA clone ZM_BFb0133G19 mRNA, complete cds. |
GenBank | KJ727504 | 1e-177 | KJ727504.1 Zea mays clone pUT5363 bZIP transcription factor (bZIP111) mRNA, partial cds. |