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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.3KG373600.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 333aa MW: 36709.5 Da PI: 7.9712 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.3KG373600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 31.2 | 4.8e-10 | 47 | 83 | 5 | 41 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41
k+ rr+++NReAAr+sR+RKka++e+Le+ +L +
Pavir.3KG373600.1.p 47 KALRRLAQNREAARKSRLRKKAYVEQLENSRLKLAQL 83
788*************************954444333 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MAYASPGTDT STDLDTDEKN QMLELGQLAS LAASGSGDKS KDKLGQKALR RLAQNREAAR 60 KSRLRKKAYV EQLENSRLKL AQLEQELQRA RQQGIFIPTP GDKPHSTSEN GALAFDTDYA 120 RWQEDHNKQI NELRGALNAH AGDDDLRRIV DSVMAHYGEA FRLKGVAAKA DAFHVLSGMW 180 KTPVERCFLW LGEFRPSELL KLLASRLEPL TEQQLASICN LQQSSQKAEE DLSLGVKALQ 240 QSVAETLASG SLCPAGSSGN AADCSEQMAV AIGKLGTLEN FLQEADNLRL QTLQQMQRVL 300 TTRQSARALL AISDYFSRLR VLSSLWIARP RE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |