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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.3KG258500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 368aa MW: 40118.3 Da PI: 7.2968 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.3KG258500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 50.4 | 4.9e-16 | 297 | 340 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48
+r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk+
Pavir.3KG258500.1.p 297 RRQKRMIKNRESAARSRARKQAYTNELENKVSHLEEENERLKKQ 340
69***************************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 368 aa
Download sequence Send
to blast |
MLFVFGSDHV FYLLTSIFLQ KLLGVHVYAH ILCRVRPWFM IQAMASQAGG GRGGGAGSAQ 60 HGQVQGLSRQ GSLYNLTLDE VQNHLGEPLL SMNFDELLKS VLPDGIDPNG TVIGKPDPAS 120 SLQRQGSIMM PPQLSKKTVD EVWKGIQDGP ETSATDSGRH RRERQPTLGE MTLEDFLVKA 180 GVVSEGLMKD SDDLPSNMNT VGSDVVAGGT SGLNSGAQWL QQYQQQALEF RQPSLVGSYM 240 ASQLAPQPLS VATGAMLDSI YSDGQITSPT VGAFSDPQTP GRKRGASGEV VDKVIERRQK 300 RMIKNRESAA RSRARKQAYT NELENKVSHL EEENERLKKQ KEFDEILSSA LPPEPKHQLR 360 RTSSAAF*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}. |
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}. |
Functional Description ? help
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Source |
Description |
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |