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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.3KG235200.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
FAR1 |
| Protein Properties |
Length: 312aa MW: 35035.6 Da PI: 9.3268 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.3KG235200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 54.9 | 2.9e-17 | 62 | 141 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
+fYn Y+ e+GF vr +s+k+ n+ t+++ vCs++g+++ +++ + r gC a++++ +++d+ w+++++++eHnH+l+
Pavir.3KG235200.1.p 62 DFYNLYSWEIGFGVRYGRSRKN-SNKYRTRQDIVCSCQGQSTAGSTR---------TCRRGCPAMIRLLRTHDHGWYISRVVKEHNHDLS 141
6******************999.67779***********99987665.........8899****************************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MDSFFACYVV GGRAISGPDA RIAPWEESAV SKALRAGEGR SNKPVFEPVV GTSFNSCEEA 60
KDFYNLYSWE IGFGVRYGRS RKNSNKYRTR QDIVCSCQGQ STAGSTRTCR RGCPAMIRLL 120
RTHDHGWYIS RVVKEHNHDL SDSYAENKQW NSHNQIDALT KDFIRKLRNN NVSIGRVCSL 180
VGAGGNVDAV PLRKETVRNV CAKLSQENMR NDLGKTIELL QQMKDADPGM SVKFRVDTDG 240
RLQSMLWCTG KNKSDYEQFG DAITFDTTYR TNLYKMPFGL FVGVNNHFQS VIFGGVLLTT 300
AIRIYADVPY K*
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