PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pavir.3KG028800.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
Family bZIP
Protein Properties Length: 148aa    MW: 16219.4 Da    PI: 11.1584
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pavir.3KG028800.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.61e-1164126163
                          XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          eke kr rr   NRe+Ar   +R++a  +eL++kv+ L++eN++ kke +   ke+ +lk  +
  Pavir.3KG028800.2.p  64 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSENETIKKEKDLVMKEYLSLKETN 126
                          89**********************************************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-562128No hitNo description
SMARTSM003387.7E-1364128IPR004827Basic-leucine zipper domain
PfamPF001701.9E-1064127IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.23166129IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.99E-868124No hitNo description
CDDcd147026.57E-969119No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MTDDEEMAST RLSLQLGGVG IQSSSCSSGG SNAGRPSSRQ PAPAHAAAPA THGPRPRHML  60
TEAEKEAKRL RRVLANRESA RQTILRRQAI RDELARKVAD LSSENETIKK EKDLVMKEYL  120
SLKETNKQLK AQHASLRRPK QRKQAGA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPavir.3KG028800.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025809461.13e-69light-inducible protein CPRF2-like
TrEMBLA0A2S3H5Z78e-68A0A2S3H5Z7_9POAL; Uncharacterized protein
TrEMBLA0A2T7E5998e-68A0A2T7E599_9POAL; Uncharacterized protein
STRINGPavir.Ca00162.1.p1e-90(Panicum virgatum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.14e-18bZIP family protein