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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.3KG017300.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
GRAS |
| Protein Properties |
Length: 178aa MW: 19774.3 Da PI: 8.3219 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.3KG017300.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 132.5 | 4.6e-41 | 7 | 147 | 226 | 374 |
GRAS 226 evLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekW 315
+L++ + P++vv++eqea hn++sF +rf+eal+yy+a +dsl+a+ r+ vEr++lg+e+++v+ ega+rrerh +l++W
Pavir.3KG017300.1.p 7 GFLSAARAAAPEIVVLAEQEAGHNGASFRKRFAEALRYYAAAYDSLDAE-------RAEVERAVLGEEVRDVLLREGARRRERHDRLQQW 89
69*********************************************99.......9********************************* PP
GRAS 316 rerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+r+e+aGF+ v+ls+ a q + + +g+ + +g+l+l+W++ pL+svSaWr
Pavir.3KG017300.1.p 90 ARRMEAAGFRGVALSYAALRQGWTRWGGAA-WGMCEQRARGWLLLCWRSWPLYSVSAWR 147
**************************9999.999999*********************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 178 aa
Download sequence Send
to blast |
MPAALAGFLS AARAAAPEIV VLAEQEAGHN GASFRKRFAE ALRYYAAAYD SLDAERAEVE 60
RAVLGEEVRD VLLREGARRR ERHDRLQQWA RRMEAAGFRG VALSYAALRQ GWTRWGGAAW 120
GMCEQRARGW LLLCWRSWPL YSVSAWRPDT GSAYGVGSGY HLSPSAPPDH CFEELMC*
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