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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.3KG017200.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
GRAS |
| Protein Properties |
Length: 271aa MW: 29104.4 Da PI: 8.6837 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.3KG017200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 128.5 | 7.9e-40 | 2 | 208 | 18 | 222 |
GRAS 18 elaqalLarlselaspdg.dpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevsPilkfshltaNqaIlea 105
e+a ++L+r la+ ++ p+ Rla ++ La+rl r +v+ +++al ++++ + + aa ++f+e+sP++k + +aN+ lea
Pavir.3KG017200.1.p 2 EKAARCLSRATGLAAAARdGPLPRLAVPVADCLARRLIRpMVPAVAAALID-PSDHLDRRCVRAACRTFFELSPFPKAAVAVANRVTLEA 90
56888999999995555538*******************777777766633.3333445556678899********************** PP
GRAS 106 vegeervHiiDfd..isqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
+e+e+ vH+iDf + q+ QW+ Ll+ + sRpeg+p+lR+T+v++ + e l ++ e L++ A+el+vpf+ + va ++e+l+l++
Pavir.3KG017200.1.p 91 MENEKNVHVIDFAgpAAQPCQWIQLLRDFHSRPEGAPHLRLTVVHD----DGEFLARVSESLTDEADELDVPFQVHC-VAGQIEKLDLND 175
************75589*****************************....***************************.7999****9999 PP
GRAS 194 L....rvkpgEalaVnlvlqlhrlldesvsles 222
L +k+gEa a+ + +lhrll+ s + +
Pavir.3KG017200.1.p 176 LhgvlGLKSGEARAIVCTTRLHRLLAASDDYAA 208
866557889****************77765544 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MEKAARCLSR ATGLAAAARD GPLPRLAVPV ADCLARRLIR PMVPAVAAAL IDPSDHLDRR 60
CVRAACRTFF ELSPFPKAAV AVANRVTLEA MENEKNVHVI DFAGPAAQPC QWIQLLRDFH 120
SRPEGAPHLR LTVVHDDGEF LARVSESLTD EADELDVPFQ VHCVAGQIEK LDLNDLHGVL 180
GLKSGEARAI VCTTRLHRLL AASDDYAASS SSLSSAGHHS NQMAASIARL QQMAASCSAR 240
RASAAPRARM ATTATLTAAP PRRWASCRRR *
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