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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.2NG608500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 574aa MW: 60544.4 Da PI: 6.155 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.2NG608500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 45.3 | 1.9e-14 | 118 | 177 | 3 | 62 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
e kr r+ +NRe+A sRqRKk+++eeLe kvk+++a +L +++ + e a lk++
Pavir.2NG608500.1.p 118 EAKRRARLVRNRESAHLSRQRKKQYVEELEGKVKAMQATIADLSARISCVTAENAVLKQQ 177
78***************************************************9999997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 574 aa
Download sequence Send
to blast |
MAEPTLLAPA APDSFGDFSF AEFQAPVDGA NFAFEDFDLE DLDLDVDFDL DLFASDGPLS 60 QPPPLATSSS SAGSPEGGSS SSGAGGDGGL RNEEPSESSS RSAIGTDGSG KGKAEDDEAK 120 RRARLVRNRE SAHLSRQRKK QYVEELEGKV KAMQATIADL SARISCVTAE NAVLKQQLGG 180 AAGTAPPPPP LPMYPAVYPL PMPWMHPAYA MRGSQVPLVP IPRLKPQQPA PATAEPPAKK 240 ARKTKKVASV SLLGLLCLVM LCGCLIPAVN RMYGPVDGGE GAAFGPSHHG RVLAVEGPRD 300 TVSDSIDPKP PQSTSEALPA LLYLPKNGKH VKINGNLVIK SIVAGEKASL QMSGYDGKSP 360 RNQGKEETSL AIPGYVAPLE AGDVMESTSG MKNKLMALAP ADGNMYREDD GLLPQWFSEA 420 MSGPLLSSGM CTEVFQFDVS PSSAHANGIV PVYSNAMSNS TQNFTENLPS AHPHTVKNRR 480 ISYSEAIPLK GSTSNNTEHL KTPPKNESFG SMKPVSSVVV SVLADPREAG DGNGEGRISS 540 KSLSRIFVVV LIDSVKYVTY SCVLPFKNHS PHL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269|PubMed:22050533}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000305|PubMed:22050533}. |
Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Oono Y, et al.
Analysis of ER stress in developing rice endosperm accumulating beta-amyloid peptide. Plant Biotechnol. J., 2010. 8(6): p. 691-718 [PMID:20331531] - Hu J, et al.
The Bphi008a gene interacts with the ethylene pathway and transcriptionally regulates MAPK genes in the response of rice to brown planthopper feeding. Plant Physiol., 2011. 156(2): p. 856-72 [PMID:21487048] - Takahashi H,Kawakatsu T,Wakasa Y,Hayashi S,Takaiwa F
A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response. Plant Cell Physiol., 2012. 53(1): p. 144-53 [PMID:22084314] - Ohta M, et al.
Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants. J. Exp. Bot., 2013. 64(18): p. 5429-41 [PMID:24153418] - Cheng Q, et al.
An alternatively spliced heat shock transcription factor, OsHSFA2dI, functions in the heat stress-induced unfolded protein response in rice. Plant Biol (Stuttg), 2015. 17(2): p. 419-29 [PMID:25255693]
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