|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.2NG467900.2.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
Family |
bZIP |
Protein Properties |
Length: 375aa MW: 40628.9 Da PI: 7.1029 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.2NG467900.2.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 31.3 | 4.5e-10 | 85 | 127 | 3 | 45 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
+ k++rr+++NReAAr+sR RKka+i eLe ++L + ++L
Pavir.2NG467900.2.p 85 DQKVQRRLAQNREAARKSRMRKKAYIVELESSRAKLAQLEQEL 127
679***************************9888887766655 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 375 aa
Download sequence Send
to blast |
MAPPGMASAA DDGRFCLPWA AAHFENWGDS GGIVVTSPLT ETTCTDADDA SGDRQPAQMG 60 GGAITQSVAA YMDSCAASKE GSCRDQKVQR RLAQNREAAR KSRMRKKAYI VELESSRAKL 120 AQLEQELQRA RQQGMFIASG RTGDHGGSTG GASAAFDLEY ARWLDEHQRH MTDLRVALGA 180 QLGDDDLRVL VDGAMLHYEQ LFRLKGAATR ADVFHVLSGM WVSPAERFFM WLGGFRSSEL 240 LAVLARQVEP LTEQQLVGLC SLRQSSQQAE DALSQGIEAL QQALADTLAA AGASAAGAAA 300 DGVTNYMGQM AVAMGKLATV ENFLRQADLL RQQTLQQMRR ILTTRQAARA LLVVSDYFSR 360 LRALSSLWLT RPRD*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT085145 | 0.0 | BT085145.1 Zea mays full-length cDNA clone ZM_BFb0304K15 mRNA, complete cds. |
GenBank | KJ727560 | 0.0 | KJ727560.1 Zea mays clone pUT5420 bZIP transcription factor (bZIP57) mRNA, partial cds. |