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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.2NG467900.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 500aa MW: 54118.5 Da PI: 9.9734 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.2NG467900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 30.7 | 6.7e-10 | 210 | 252 | 3 | 45 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
+ k++rr+++NReAAr+sR RKka+i eLe ++L + ++L
Pavir.2NG467900.1.p 210 DQKVQRRLAQNREAARKSRMRKKAYIVELESSRAKLAQLEQEL 252
679***************************9888887766655 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 500 aa
Download sequence Send
to blast |
MRCPASRPVL SLTVHIHPRC TARQQPSWSA VPRRRIARRR RRCFALVPVA VHPRPTMHPH 60 PSHAFRAEQG AGGYHHHHRG VGDGALLPEL PRSPNPSSKS SSNLTAATLL APLAVAHGGV 120 APSFGMAPPG MASAADDGRF CLPWAAAHFE NWGDSGGIVV TSPLTETTCT DADDASGDRQ 180 PAQMGGGAIT QSVAAYMDSC AASKEGSCRD QKVQRRLAQN REAARKSRMR KKAYIVELES 240 SRAKLAQLEQ ELQRARQQGM FIASGRTGDH GGSTGGASAA FDLEYARWLD EHQRHMTDLR 300 VALGAQLGDD DLRVLVDGAM LHYEQLFRLK GAATRADVFH VLSGMWVSPA ERFFMWLGGF 360 RSSELLAVLA RQVEPLTEQQ LVGLCSLRQS SQQAEDALSQ GIEALQQALA DTLAAAGASA 420 AGAAADGVTN YMGQMAVAMG KLATVENFLR QADLLRQQTL QQMRRILTTR QAARALLVVS 480 DYFSRLRALS SLWLTRPRD*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT085145 | 0.0 | BT085145.1 Zea mays full-length cDNA clone ZM_BFb0304K15 mRNA, complete cds. |
GenBank | KJ727560 | 0.0 | KJ727560.1 Zea mays clone pUT5420 bZIP transcription factor (bZIP57) mRNA, partial cds. |