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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.2NG353900.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 356aa MW: 38264.3 Da PI: 9.8813 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.2NG353900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 43.9 | 5.1e-14 | 276 | 326 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55
+r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L + e+ ++
Pavir.2NG353900.1.p 276 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKELNQELERKQAEIMEM 326
79*************************************998777666665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MEFMNGGSSK QRRPAREEGA PLPRQGSVYS LTFDEFQSAL GRAAAGGGGG TGKDFGSMNM 60 DELLRNIWNA EETQAMASAS GAGVPPTMLQ RQGSSLTLPR TLSAKTVDEV WRNLVRDEPP 120 QGADGNGQEQ AHRQSTLGEM TLEEFLVRAG VVRENPAPAP APPPMLPPRP VPVAPTSSAL 180 FGNFQGADDA ATAAALGFAP VRMGDLALGN GLMPPRATGG MGGSAAMAVQ TAVNQIDSGG 240 KGYSDLSSPT EPLPYSFEGM IRGRRNGAGV EKVVERRQRR MIKNRESAAR SRARKQAYTM 300 ELEAEVQKLK ELNQELERKQ AEIMEMQKNE VPEMLKDPFG RKKRACLRRT LTGPW*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in roots, leaves and embryos. {ECO:0000269|PubMed:10611387}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}. |
Publications
? help Back to Top |
- Kagaya Y,Hobo T,Murata M,Ban A,Hattori T
Abscisic acid-induced transcription is mediated by phosphorylation of an abscisic acid response element binding factor, TRAB1. Plant Cell, 2002. 14(12): p. 3177-89 [PMID:12468735] - Kobayashi Y, et al.
Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors. Plant J., 2005. 44(6): p. 939-49 [PMID:16359387] - Kobayashi F,Maeta E,Terashima A,Takumi S
Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings. Physiol Plant, 2008. 134(1): p. 74-86 [PMID:18433415]
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