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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.2NG307100.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
LBD |
Protein Properties |
Length: 240aa MW: 25685.5 Da PI: 4.3614 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.2NG307100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 36.9 | 1.1e-11 | 1 | 44 | 58 | 101 |
DUF260 58 msslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101
m++l+y++eara dPv G+v +i +lq+q+e+++ ela++k+++
Pavir.2NG307100.1.p 1 MRALIYQSEARAADPVGGCVTIIEQLQRQIERTELELAYVKQQI 44
899**************************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 240 aa
Download sequence Send
to blast |
MRALIYQSEA RAADPVGGCV TIIEQLQRQI ERTELELAYV KQQIAFYRQA AAVDPLADPA 60 MILPPPDAAA AVAGQDHQDN AAAVAVGALY AGQEPVPPGA AGLVFQDQQG YHHHHVLKAD 120 QQNHPPPQQL YNYFCYDGTA ADESTQDGSV QQFGGFADTG GLKIGSPTLA TLGEQLEQQC 180 QLDAFDVKPP GLRATTERHG PADELMRPAE DHHDVDQHME EPATAVAAPC HLELGFSSF*
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