 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.2NG227600.2.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
Family |
FAR1 |
Protein Properties |
Length: 263aa MW: 30004.6 Da PI: 6.6014 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.2NG227600.2.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 50.4 | 7.5e-16 | 129 | 216 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtkleleH 85
+fY++YA+++GF+ +k++++ + +r f+C++ gk e kk++ ++++ +++++t+C a++k+k ++ +++ e+++++l+H
Pavir.2NG227600.2.p 129 EFYCTYAEKAGFEPKKANKSGN-------TRYFRCNRFGKGEYYKKDEAERKTGKTSKKTSCLAMIKLKFRRdeesnEKVAEIEQVRLDH 211
6************999875555.......789***************888888999************9776554445667899999*** PP
FAR1 86 nHela 90
nH l
Pavir.2NG227600.2.p 212 NHVLL 216
**997 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 263 aa
Download sequence Send
to blast |
MATRRLQFGE VGEQGDVPVR KEQEVIVEEA TRCNLGMQQD VSENQGIQGG VSNERRMNID 60 EGIHTPHASS MTEGEEGCSR NIITPPATVD PSDIQTPNPG HIYTHRDDMD EAWIPRVGRC 120 FKSEEEAHEF YCTYAEKAGF EPKKANKSGN TRYFRCNRFG KGEYYKKDEA ERKTGKTSKK 180 TSCLAMIKLK FRRDEESNEK VAEIEQVRLD HNHVLLPKPT ETKQMRAHKN KDPLLLDYVD 240 DLQANDVPNH CVRNIIREGQ RI*
|