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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.2NG201900.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 313aa MW: 33220.9 Da PI: 8.9908 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.2NG201900.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 75.6 | 6.7e-24 | 204 | 266 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv L+a N +L++el++lkk ++ +++e+
Pavir.2NG201900.2.p 204 ERELKRERRKQSNRESARRSRLRKQQECEELAQKVTDLTAINGTLRSELDQLKKACEDMEAEN 266
89*********************************************************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MQAYYAAGGQ PYAWHAAQQH MLAAAAAAAG APYGTPMPFH VSFHPAYYAH AAMATSVPYT 60 AGEALAVAEG KSKRKSSGAP SVGSASGSNG GSEEASEKRD ASAGHKLLPS AKRRKSTGAN 120 GQGEPSQAAI MQDVAAEARS AAKRPGKLSV STTEMAAISN ARPNLNIGID LWSNSPVKAE 180 TSGPIQINAA APSHDVPLSH MQDERELKRE RRKQSNRESA RRSRLRKQQE CEELAQKVTD 240 LTAINGTLRS ELDQLKKACE DMEAENSQLM GEMEQAEAPS VVTTLSMHID TAKVHHGKSD 300 QHRDKNNNDS KG*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 220 | 226 | RRSRLRK |
2 | 220 | 227 | RRSRLRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Interacts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G32150.1 | 1e-27 | basic region/leucine zipper transcription factor 68 |