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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.2NG183000.4.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 325aa MW: 34968 Da PI: 6.5463 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.2NG183000.4.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 50.6 | 4.1e-16 | 254 | 297 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48
+r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk+
Pavir.2NG183000.4.p 254 RRQKRMIKNRESAARSRARKQAYTNELENKVSHLEEENERLKKQ 297
69***************************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MASQAGGGRG GDAGSAQHGQ VQGLARQGSL YNLTLDEVQN HLGEPLLSMN FDELLKSVLP 60 DGVDPNGTVT GKPDTASSLQ RQGSIMMPPQ LSKKTVDEVW KGIQDGPGTS ATDGGRHRRE 120 RQPTLGEMTL EEFLVKAGVV SEGLMKDSDD LPSNMNTFGS NVVAGGGSGL NSGAQWLQQY 180 QQQALESRQP SLVGSYMASQ LSPQPLSVAT GAMLDSIYSD GQITSPTVGA FSDPQTPGRK 240 RGALGEVVDK VIERRQKRMI KNRESAARSR ARKQAYTNEL ENKVSHLEEE NERLKKQKEF 300 DEILSSALPP EPKYQLRRTS SAAF*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}. |
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}. |
Functional Description ? help
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Source |
Description |
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |