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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.2NG183000.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 389aa MW: 42488 Da PI: 8.9473 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.2NG183000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 50.3 | 5.3e-16 | 318 | 361 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48
+r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk+
Pavir.2NG183000.1.p 318 RRQKRMIKNRESAARSRARKQAYTNELENKVSHLEEENERLKKQ 361
69***************************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 389 aa
Download sequence Send
to blast |
MPAHSLPFLS AVRNRTPKPL TYANCIRIRP CILPTDFDFL QKLLGVHVYA HILYWVRPWF 60 MIQAMASQAG GGRGGDAGSA QHGQVQGLAR QGSLYNLTLD EVQNHLGEPL LSMNFDELLK 120 SVLPDGVDPN GTVTGKPDTA SSLQRQGSIM MPPQLSKKTV DEVWKGIQDG PGTSATDGGR 180 HRRERQPTLG EMTLEEFLVK AGVVSEGLMK DSDDLPSNMN TFGSNVVAGG GSGLNSGAQW 240 LQQYQQQALE SRQPSLVGSY MASQLSPQPL SVATGAMLDS IYSDGQITSP TVGAFSDPQT 300 PGRKRGALGE VVDKVIERRQ KRMIKNRESA ARSRARKQAY TNELENKVSH LEEENERLKK 360 QKEFDEILSS ALPPEPKYQL RRTSSAAF*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}. |
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}. |
Functional Description ? help
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Source |
Description |
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |