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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.2KG400200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 230aa MW: 25518.9 Da PI: 9.8136 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.2KG400200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 39.5 | 1.2e-12 | 130 | 185 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58
+ +r rr+ +NRe+ArrsR RK+ ++ eL v L + N++L +el++ ++
Pavir.2KG400200.1.p 130 DERRRRRMVSNRESARRSRMRKQRQLTELWAQVVHLRGTNRRLLDELNHAMRGCSD 185
5679999*****************************************98877765 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 230 aa
Download sequence Send
to blast |
MAMHQYNKLK LPNSTKRKGA REGGFSLSLV LATPTSLLKI STGQTSEVAM LHQHHYHGGV 60 AMANLHCLTS PNPAFHAHYH SNMIAMPPTP FQFPPTFEPT HEAPAAVGNS PAGSGSADDA 120 YGGRMVMAED ERRRRRMVSN RESARRSRMR KQRQLTELWA QVVHLRGTNR RLLDELNHAM 180 RGCSDMCCEN ARLEKEKAEL GTKLERLMQA QNTTTPSSSS EPRDDTATE*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 144 | 151 | RRSRMRKQ |