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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.1NG561100.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
G2-like |
| Protein Properties |
Length: 413aa MW: 45581.9 Da PI: 6.3208 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.1NG561100.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 107.3 | 8.6e-34 | 244 | 298 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k r+rWtpeLHerFv+av++LGGsekAtPk++ ++mkv+gLt++hvkSHLQkYR+
Pavir.1NG561100.1.p 244 KSRIRWTPELHERFVDAVNKLGGSEKATPKAVQKVMKVEGLTIYHVKSHLQKYRT 298
68****************************************************7 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 413 aa
Download sequence Send
to blast |
MGTACSHRST MNQLYNGTVP PCLSSAIIVV PALSEVSFPS FPEQRSSYGE SELPISHVTS 60
FGNSMAAQDA MSTCMLASNF TSDLHANNKS SDLKLCSGPY VTEPSDPDTQ LSSTHSSLLH 120
NSRPLMMDFP EVSEQISSNQ EQLQGLFDYA ASVDFPNPQN VTAFGQQVQA TMTIDPNTNV 180
ALANEWFSSG SSMVLHKNTV DARSATRATP KISPYFRTQR SGPNPVNCDE LCSDNLPSSN 240
TAPKSRIRWT PELHERFVDA VNKLGGSEKA TPKAVQKVMK VEGLTIYHVK SHLQKYRTVQ 300
HRPESSNGVP GWRSNQTDEA STLQLKGTGN VEGLMAQISL QKQLHEQLEI QRKLQLQVEE 360
HSRYLEVIIA KQNESLKKLG ALPGFQDRFL QVLDDNKERE EWAVCTHSAE DR*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 9e-28 | 244 | 302 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 9e-28 | 244 | 302 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 9e-28 | 244 | 302 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 9e-28 | 244 | 302 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 9e-28 | 244 | 302 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 9e-28 | 244 | 302 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 9e-28 | 244 | 302 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 9e-28 | 244 | 302 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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