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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.1NG419000.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
Nin-like |
| Protein Properties |
Length: 216aa MW: 25293.7 Da PI: 6.7917 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.1NG419000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 84.7 | 8.6e-27 | 93 | 143 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
++ +++e +s+y s+pik+AA+eL+v+lTvLK++CR++GI+RWPhRk+ksl
Pavir.1NG419000.1.p 93 KQGLTFELVSRYLSMPIKQAARELNVGLTVLKKRCRELGIPRWPHRKVKSL 143
6789*********************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 216 aa
Download sequence Send
to blast |
MEELRFYEKG YRYYHGLKLH EDEGYFQFQD FSADYLLGEE THLCAISFPE SSFSQEELGC 60
LSEVDFASFW ALVEEEDARR KSDEGPRSGP GKKQGLTFEL VSRYLSMPIK QAARELNVGL 120
TVLKKRCREL GIPRWPHRKV KSLQTLIDNV QELGRPNAQE DGHQTRSLVE RLQRTKKLIE 180
ERPEVMLDEE TKELRQACFK ETFKRRRLLG HGTYW*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Putative transcription factor. {ECO:0000250}. |
