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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.1NG315400.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
EIL |
Protein Properties |
Length: 353aa MW: 38463.4 Da PI: 4.9616 |
Description |
EIL family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.1NG315400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | EIN3 | 325.5 | 1.4e-99 | 1 | 238 | 49 | 293 |
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STT CS
EIN3 49 msraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslse 138
m raQDg+L++Mlk+me+cna+GfvYg i+e g+p++g+sdsLr+WWk++v+fd +gp+a++ +ges l s h+l++
Pavir.1NG315400.1.p 1 MLRAQDGVLRHMLKMMEACNARGFVYGVIDEAGEPMSGSSDSLRGWWKDNVSFDGAGPMALTGP-------AGESPLG--IASCLHRLQD 81
78************************************************************98.......4667773..58899***** PP
S-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHT CS
EIN3 139 lqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirel 227
+qD+tlgS+Lsal+qhc+ppqr+fple+g++pPWWPtG+e+wwg++g ++++qg ppy+kphdlkkawk+s+L+av+khmsp+++++r+l
Pavir.1NG315400.1.p 82 IQDSTLGSVLSALIQHCEPPQRSFPLERGLAPPWWPTGHEAWWGSQGeVQAHQGVPPYRKPHDLKKAWKISLLSAVMKHMSPRFDQMRKL 171
****************************************************************************************** PP
TTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXX.X CS
EIN3 228 erqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedve..gkkeskik 293
++qsk+lq+kmsake+ +++++++qee + ++++++ + + + + ++e +ed++ ++++k +
Pavir.1NG315400.1.p 172 VWQSKRLQQKMSAKETETWSKIIKQEEVLSRRLKSSLQITPLDGGDDDGEEE-EEDRDgrAHDKRKRE 238
*****************************99999996632223333333322.334442233333323 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MLRAQDGVLR HMLKMMEACN ARGFVYGVID EAGEPMSGSS DSLRGWWKDN VSFDGAGPMA 60 LTGPAGESPL GIASCLHRLQ DIQDSTLGSV LSALIQHCEP PQRSFPLERG LAPPWWPTGH 120 EAWWGSQGEV QAHQGVPPYR KPHDLKKAWK ISLLSAVMKH MSPRFDQMRK LVWQSKRLQQ 180 KMSAKETETW SKIIKQEEVL SRRLKSSLQI TPLDGGDDDG EEEEEDRDGR AHDKRKRELI 240 STRHNSSGST SSSGVSSGEL AFVLPPELAD LLAEDESLGS PIDELAKLYC YSHHAPADQG 300 GGGHLENCAV AMVPPGELED LIGGVDAVPP DVLFDLIGSC SGLDDVVRLM GD*
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ726967 | 0.0 | KJ726967.1 Zea mays clone pUT3668 EIL transcription factor (EIL5) gene, partial cds. |