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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.1NG298900.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
bHLH |
| Protein Properties |
Length: 335aa MW: 34955.6 Da PI: 9.1742 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.1NG298900.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 30.5 | 6.4e-10 | 115 | 163 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
+ah + Er RR+r+++ f +L +P+ + +K++Ka+ + +++++I+ L+
Pavir.1NG298900.1.p 115 KAHIITERERRKRMKDLFTNLHAFMPHvP-----TKVDKATLVGETIHFIRALE 163
68*************************77.....9****************985 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0008152 | Biological Process | metabolic process |
| GO:0009793 | Biological Process | embryo development ending in seed dormancy |
| GO:0016597 | Molecular Function | amino acid binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MAQNGPHDHH QGAAAASNER SFTPPTTMTF LGPAENHNGG SRIGSPVGMD ARKGKDGVLP 60
NAIQGEEHGS AGCGEANADK SKGKHPAARE AATNAAGHGL PGKGSLAADD GGDAKAHIIT 120
ERERRKRMKD LFTNLHAFMP HVPTKVDKAT LVGETIHFIR ALEQTKAQLE RRKQEQALAR 180
QAAAEAVVST LLSAPQTAHG MAAMSNGWGP AVPQQQQQPL AAAATAPPAP SPPLAVATGL 240
AGFQTWSAPN VVLSVSNEKA IINVCLPRQP RMLTLVMSVL SKHGIDVITV HIGADGPRSL 300
ITIYTRVNVA GGESPSAEDI YKLAVSEIMV WLTT*
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