 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pavir.1KG425200.2.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
G2-like |
| Protein Properties |
Length: 274aa MW: 27539.6 Da PI: 8.6933 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.1KG425200.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 102.5 | 2.7e-32 | 76 | 129 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
Pavir.1KG425200.2.p 76 PRMRWTTALHARFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 129
9****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MAPPYAEGSG EVGFFANPSP GAEPPGLSLG LGTPALGGDA AGRRDHLEPQ GCAFKRAATS 60
RASLPAGGSK RSSRAPRMRW TTALHARFVH AVELLGGHER ATPKSVLELM NVKDLTLAHV 120
KSHLQMYRTV KSSDRSLHIA TGEALPLQRT ATGMEAAAAA AGGGGGGAAA GGGVVVVPVV 180
AAACDDMVGI CSSPSAGSAP PAAATTSAAH FLCAPPATAP LAAAPSPPPL IPPRSVSACH 240
AFMYLSAIVT AVPGFYSRFC SDQELIGRLC YLV*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 2e-17 | 77 | 131 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-17 | 77 | 131 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-17 | 77 | 131 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-17 | 77 | 131 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT065124 | 1e-133 | BT065124.1 Zea mays full-length cDNA clone ZM_BFb0205B22 mRNA, complete cds. |
