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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.1KG421000.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 264aa MW: 27422.3 Da PI: 4.6909 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.1KG421000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.8 | 1.3e-18 | 78 | 126 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr + +g+Wv+eIr+p++ + r++lg+f+t+e+Aa+a++ a+++++g
Pavir.1KG421000.1.p 78 YRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFDTPEMAARAHDVAALAIKG 126
9****998.**********843...6***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 264 aa
Download sequence Send
to blast |
MSLAETASRA RCSSVMEEEG ALSPASDACT TCSSSGGGSG PGSPVASSPS ASLDDSGAAS 60 AASSRKRRPR RELKHPAYRG VRMRAWGKWV SEIREPRKKS RIWLGTFDTP EMAARAHDVA 120 ALAIKGRAAH LNYPEMSHEL PRAASAAPED VRAAAALAAA MESAAPAAPS DSSHHGAAGS 180 DEDEEPAASA SPGHDDAGNA GDEEKAASLS EYAAVHPDGL VLDLALLELP DVLLEFGFEV 240 ALPPTTPCCY DLSWDEPLLL WEH*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU970180 | 1e-124 | EU970180.1 Zea mays clone 341615 dehydration-responsive element-binding protein 1B mRNA, complete cds. |