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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.1KG420200.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
FAR1 |
| Protein Properties |
Length: 172aa MW: 19917.8 Da PI: 10.0011 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.1KG420200.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 69.2 | 9.8e-22 | 17 | 99 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
++Yn+YA vGFsvrks++k++k +++ ++ fvCs +g ++e ++ + trt C+a+++ + +k+++w v+k++ eHnH la
Pavir.1KG420200.1.p 17 EMYNNYAGLVGFSVRKSRTKRRKSDDSLSQKYFVCSGQGLGKNEASQ-------KDITRTCCDARVQFSISKENVWTVQKIVVEHNHYLA 99
58**************************************9998766.......99*******************************997 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 172 aa
Download sequence Send
to blast |
MAPKVGMTFD CEKKAYEMYN NYAGLVGFSV RKSRTKRRKS DDSLSQKYFV CSGQGLGKNE 60
ASQKDITRTC CDARVQFSIS KENVWTVQKI VVEHNHYLAS PNKIHKLRSQ REIIEADRKL 120
IGQARQSGMK PSQVFNFMKE HYGGEDKVPF TKMDCYNEIG RERRQYLKWD L*
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