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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.1KG243200.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
FAR1 |
| Protein Properties |
Length: 259aa MW: 28300.9 Da PI: 6.3122 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.1KG243200.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 45.2 | 3e-14 | 111 | 198 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkle.....leH 85
+fY eYA+ vGFs+++ +s + ++++C eg++ + kk++ + r++ + tgCka lk+++ ++k ev ++ l+H
Pavir.1KG243200.1.p 111 DFYLEYARAVGFSIKRYRSDGN-------IKWLNCRSEGTNPGKAKKEDAKGRKTGTVMTGCKAGLKLRQIVNEKKEVVAVHivlanLDH 193
6*************99876665.......689************99999999999***************99888777777666777*** PP
FAR1 86 nHela 90
nH++
Pavir.1KG243200.1.p 194 NHKFL 198
**985 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 259 aa
Download sequence Send
to blast |
MEPTAGIESG VQTPAARLGS VDSSVHETRA TSTPTAGRGE VTETMVTPPA ELRAPGNQPA 60
CAGVVGDAAT RTVSEEEMDT PEIFQRHADS IEPSLVPRVG MEFRCLDDCY DFYLEYARAV 120
GFSIKRYRSD GNIKWLNCRS EGTNPGKAKK EDAKGRKTGT VMTGCKAGLK LRQIVNEKKE 180
VVAVHIVLAN LDHNHKFLTE KEAAKHFYSH KQVESPLLDF VGAMQDSRVP EHCIIDIVSD 240
MNGGPENNPM TRQDLKNM*
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