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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pahal.I04078.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
FAR1 |
| Protein Properties |
Length: 204aa MW: 23370.8 Da PI: 6.5162 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.I04078.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 34.8 | 5.5e-11 | 41 | 93 | 36 | 90 |
FAR1 36 skegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
keg r ++k++ e+++ +r+ r+ C+a++k+ ++ dg ++++++e eHnH la
Pahal.I04078.1 41 RKEGIRGPDKRE-ESSKYSRPGIRCMCRACMKIGLK-DGFYYIYEFEPEHNHILA 93
689999999999.99999******************.***************985 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 204 aa
Download sequence Send
to blast |
MWDDDRLQAP FTAQPEEDEQ QLHVLAMAAE QGRPRAPLAT RKEGIRGPDK REESSKYSRP 60
GIRCMCRACM KIGLKDGFYY IYEFEPEHNH ILAIAIASQA HHLRSQRTIT EPQLASVEAA 120
KVVLILNKAT FDLMAKEAGG IENIEFTREH MKNKLYSKRM LTINQGDTRG VLEYLEKKIS 180
EQEKFFYCSI QVDEDDLIKL PQL*
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