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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pahal.I04013.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
ERF |
| Protein Properties |
Length: 275aa MW: 29893.7 Da PI: 7.0074 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.I04013.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 59.8 | 6.2e-19 | 97 | 147 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp k +r++lg+++ta eAa+a+++a+ +l+g
Pahal.I04013.1 97 RYRGVRQRP-WGKYAAEIRDP---ArKGARVWLGTYDTAVEAARAYDRAAFRLRG 147
7********.**********8...4445*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MALLREHLDL IRAHLLDDRH DHDDAVSSED YSASSPSPSP PAGRRPLPAL SVALPPRSAV 60
ALQQQQQLWA APPPPQIIHQ QEQSCYCPEA EEDDFRRYRG VRQRPWGKYA AEIRDPARKG 120
ARVWLGTYDT AVEAARAYDR AAFRLRGSKA ILNFPNEVAF GTAARWGPPP PPAAAPCYPT 180
AASGSKRARS PERALQEQGA GCMVIREVKR ERVQEPAASC GWDGGVAVAP TAASGVADFF 240
WEEEELLKGT ICSLPPLSPL SPYPQLAFPQ VSVS*
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